From DISI

There are many tools and scripts that are used in conjunction with DOCK. Some are distributed with DOCK, while others must be sourced from third parties. This article is a stub. Please elaborate it.

Contents 1 DOCKtools 2 ZINC Database preparation tools 3 Michael's tools 4 Eddie's tools 5 3rd party tools

DOCKtools

• chemgrid
• distmap
• solvmap
• sphgen

ZINC Database preparation tools

• RunAMSOL.csh

Michael's tools

MUD_-_Michael's_Utilities_for_Docking

Eddie's tools

You can find everything here:

• ELC

3rd party tools

• AMSOL
• Delphi

• How to compile DOCK
• SGE Cluster Docking
• MUD - Michael's Utilities for Docking
• Automated Database Preparation
• How to use the QB3 cluster
• How to run and analyze a DOCK run by hand
• How to generate an HEI database
• How to hold a hit picking party
• Understanding MakeDOCK, which automates sphere and grid generation
• Using local Subversion Repository (SVN)